Learning & teaching materials
1
BioImage Model Zoo — bioimageio.github.io
Community-driven repository of trained deep learning models for bioimage analysis.
2
NEUBIAS Academy Webinars — neubias.org
Free webinar recordings on bioimage analysis tools and methods from the NEUBIAS network.
3
I2K Conference Talks — i2kconference.org
Talks from the annual Imaging in 2K conference — practical image analysis and tools.
4
fast.ai Practical Deep Learning — course.fast.ai
Highly accessible course on practical deep learning for practitioners.
5
Chan Zuckerberg Science Imaging — cziscience.com
Resources and grants for open science in biological imaging.
JUPYTER NOTEBOOKS
Introduction to Image Analysis with Python
A series of notebooks covering numpy, scikit-image, and matplotlib for biological image analysis.
SLIDES + EXERCISES
Deep Learning for Microscopy
Lecture slides and practical exercises from our annual deep learning workshop.
TUTORIAL
Reproducible Analysis Pipelines
Step-by-step guide to building reproducible, documented image analysis workflows.